Sometimes you have to give your results the "look test". One year Mike Aldretti was the "Total Average" champion of the Major leagues over players like Don Mattingly and Eric Davis because he was a part-time platoon player having a career year. Total Baseball had a "Total Player Ranking" that listed Joe DiMaggio as the 36th best player of all time. Bobby Grich was #28.
And, yes, Mookie Jones' career "Net Points" per 40 minutes is 14.0 while Gerry McNamara's is 13.4.
No system is perfect. If the results don't come out the way you'd think they would you then try to figure out why and that's where the truth really comes out. But if most of the results look right, the system is probably pretty good.