It's not a black and white issue. In football where a defensive front 7 can get very worn down over the course of a quarter/half when the other team controls the ball. Fatigued players are less effective - that's a fact of science, and is the reason why tackling gets very sloppy when players are tired.
Sure, if your offense scores every possession, or scores easily, like the Baylor example, it can be less meaningful. But in the case of a team who struggles to score, like SU, TOP can be very important. It can actually decide the outcome of a close game. To blur the lines even further, the tipping point at which TOP becomes meaningful likely varies from team to team. So, for SU, it may be able to deal with a -5:00 TOP, whereas, Baylor can handle a -15:00 TOP.